Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931398.1_cds_XP_016478235.1_69891
CDS Infomation

[gene=LOC107799607] [db_xref=GeneID:107799607] [protein=E3 ubiquitin-protein ligase RGLG2-like] [protein_id=XP_016478235.1] [location=join(7572..7865,9818..9902,10004..10144,10255..10368,10457..10554,10735..10814,10945..11050,11139..11266,11387..11663,11782..11838,12241..12321)] [gbkey=CDS]
Sequence

ATGGGTGGAAAGAGTTCAAGAGAGGATAGTTGGAGGCAAACTTCATCAACTCGATCTTCT
TGGAATCAATACAATTATCCTCAAACTCAATCATCTTATCCACAGCAAGATAGTTACAAC
TACCCACCATCCCACCACCACCAGCAGGCTGTTCCTTCCTATGCACCTCCACCACCCCAA
CAGAATTATCCTCCACCACCACCCCAACAACAGAATTATCCTTCTCATGTTCCAAAACCG
AGACTTGATCGGAGATACTCTAGGATTGCCGACAATTATTCTTCCCTGGATGAGGTGACT
GAAGCCCTTGCACGAGAGGGCTTGGAGTCTTCAAATCTAATTGTGGGTATTGATTTCACC
AAGAGCAATGAATGGACAGGTAAGAGGTCTTTTGGTAGTCGGAGCCTACATCACATCGGG
CAGAATTTGAATCCGTATGAGCAAGCAATTTCTATAATTGGAAAGACCTTGGCCGCATTT
GATGAGGATAACTTAATTCCGTGTTTTGGATTCGGAGATGCATCAACTCATGATCAAGAT
GTATTCAGTTTCTTTCCCGATGAAAGATTTTGTTATGGTTTTGAGGAAGTTCTATCTCGT
TACAGAGAAATTGTCCCCGAGCTAAAGCTTGCAGGACCAACGTCGTTTGCCCCGGTCATT
GAAATGGCCATGACAATAGTTGAGCAGAGTGGTGGTCAGTACCATGTTCTAGTAATCATT
GCAGATGGGCAGGTTACTAGAAGTGTTGATACTGGACATGGACAATTAAGTCCACAGGAG
CAGAAAACAGTTGATGCAATCGTACGAGCAAGCAAGTTTCCCTTGTCAATTATACTGGTT
GGGGTTGGCGATGGACCCTGGGATATGATGAAGGAATTTGATGATAATATTCCTGCTCGG
GATTTTGATAATTTCCAGTTTGTCAATTTCACGGAGATCATGGCCAAAAATGTATCTCAA
ACTCGAAAGGAGACGGAGTTTGCTCTTTCAGCATTGATGGAAATCCCTACACAATATAAA
GCAACCATGATGCTTAACCTACTGGGTGGACAAAGTGGAACGTCTCCTAGTAGGGTAGCT
CTTCCCCCTCCTATGTATGGGGCAACATCTGTCGGTGGTTCAAAGCCCTCACGTGCAGCG
AGTTTTCAGCAGCCCACAAGCGCTTATTACGGTTATGGAAGCCCTGCTGATGCACCTCCG
CATCTTCAGCAGACTCCAAGTTCGTATTATGATCACACTCGCGCAGTTGACACTGCTCCA
TCTGCTCCCAGATCTCCCTACACTGCTCCATCTGCTACCACCTCCTCTACATACGACAAT
CAGGTTTGCCCCATTTGCCTTACCAACCCAAAAGACATGGCCTTTGGCTGTGGGCATCAG
ACATGTTGTGAGTGCGGGAGGGCGCTTGAAAATTGCCCTATATGTCGAAGTTCAATTCAA
ACCCGAATAAAGCTCTACTGA

Peptide Sequence

PEP ID

XP_016478235.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Nicotiana tabacum]
Sequence

MGGKSSREDSWRQTSSTRSSWNQYNYPQTQSSYPQQDSYNYPPSHHHQQAVPSYAPPPPQ
QNYPPPPPQQQNYPSHVPKPRLDRRYSRIADNYSSLDEVTEALAREGLESSNLIVGIDFT
KSNEWTGKRSFGSRSLHHIGQNLNPYEQAISIIGKTLAAFDEDNLIPCFGFGDASTHDQD
VFSFFPDERFCYGFEEVLSRYREIVPELKLAGPTSFAPVIEMAMTIVEQSGGQYHVLVII
ADGQVTRSVDTGHGQLSPQEQKTVDAIVRASKFPLSIILVGVGDGPWDMMKEFDDNIPAR
DFDNFQFVNFTEIMAKNVSQTRKETEFALSALMEIPTQYKATMMLNLLGGQSGTSPSRVA
LPPPMYGATSVGGSKPSRAASFQQPTSAYYGYGSPADAPPHLQQTPSSYYDHTRAVDTAP
SAPRSPYTAPSATTSSTYDNQVCPICLTNPKDMAFGCGHQTCCECGRALENCPICRSSIQ
TRIKLY

Transcript Sequence

Gene sequence data has not been registered.